Data in ARAMEMNON
-
- Membrane protein description
- manually curated protein descriptions
- bibliographic references (monthly updated)
-
- Sequence data and predictions
- sequence: protein, cDNA, genomic DNA
- genomic DNA: exon positions, 5'-UTR (~1800 bp), 3'-UTR (~300 bp)
- protein: conserved domains (PFAM database)
- protein: calculated molecular weight and isoelectric point
-
- Membrane protein topology predictions
- alpha helix transmembrane spans: positions, hydrophobicities
- beta barrel protein
- subcellular location: chloroplast, mitochondrion, secretory pathway, nucleus
- posttranslational lipid modifications: GPI-anchor, myristoylation, prenylation
-
- Relationships to homologous proteins
- clusters of homologous protein sequences
- cladograms and lists of homologous protein sequences